Usertree

This command allows you to specify a user tree. The user tree can then be used as a starting tree for a MCMC analysis. The format for the command is

usertree = <tree in Newick format>

For example,

usertree = (A,B,(C,D))

specifies an unrooted tree of four species. Note that the program requires that trees are binary (i.e., strictly bifurcating). Hence, there can be only one three-way split, as shown in the example. If the tree is not binary, the program will return an error.

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